Probably easier to give you a total cost on construction rather than break it down (unless noted below):
permits probably around $25,000
The home probably around $300 to $350 per square foot or more for nice finishes (adding for things that make the construction more expensive, steep lot, extra grading, engineering (as snow loads vary by elevation), framing details (trusses vs. stick framed) etc).
This would be a starting point as contractor fees vary as do the definition of mid to high end finishes. if you would like more specifics send me an e-mail at Trevor@Ttahoe.com